Passing a background check and receiving clearance is among the biggest barriers to federal employment. This can make holding an active clearance (or being eligible for one) one of the most valuable assets for advancing your federal career. If you can get a job that confers a clearance, you’ll often be able to move into subsequent cleared roles without repeating the full investigation process, which makes you much more competitive for future government roles.

This guide explains how the clearance system works, which roles require clearances, and how to navigate the process successfully. This is especially relevant for emerging technology policy, where national security considerations make clearances particularly common and valuable.

Levels of background checks and security clearances

All federal jobs and most contractor positions require background checks. There are three progressively more intense levels of vetting1, depending on the position: 

  1. Credentialing: Basic identity, background, and criminal history checks confirming you’re who you say you are and are legally eligible for government work. Required for all federal employees.
  2. Suitability: Deeper check demonstrating honesty, reliability, and financial responsibility for “Public Trust” positions, which involve sensitive but unclassified information (low, moderate, or high risk).2
  3. Security Clearance: Required for positions that involve accessing Confidential, Secret, or Top Secret classified information. Involves extensive background checks that can include interviews with you and your contacts and, in rare cases, a polygraph exam.

For security clearances, there are three levels of classified national security information and corresponding security clearance levels:

Clearance level DescriptionDistribution of Clearances by Level Processing Time 
ConfidentialUnauthorized disclosure could cause damage to national security Less than 10% of all clearance are granted at this levelAverage Case: 4-5 months; Complex cases: 6-12 months
SecretUnauthorized disclosure could cause serious damage to national securityAbout 65% of all clearances are granted at this levelProcessing times are the same as Confidential clearance
Top Secret (TS)Unauthorized disclosure could cause exceptionally grave damage to national securityAbout 25% of all clearances are granted at this levelAverage: 8 months; Complex cases: 12+ months

Confidential clearances are rarely issued because they require the same investigation as Secret clearances. (It’s more practical to issue Secret clearances to personnel who primarily need Confidential access but may occasionally require Secret access.)

Beyond Secret or TS clearances, some positions require access to: 

  • Special Access Programs (SAPs) – particularly sensitive 1) Intelligence, 2) Acquisition, and 3) Operations/Support projects.
  • Sensitive Compartmented Information (SCI) – an Intelligence SAP, access to which generally occurs within a secure office space, known as a “Sensitive Compartmented Information Facility” (SCIF) or a “vault.”

These aren’t separate clearance “levels” but rather additional formal access authorizations that impose stricter safeguarding and access requirements. In practice, this means you may need both a clearance and a specific authorization for SCI or other SAPs to work on certain projects. Some SCI and other SAPs require a polygraph examination.3 

Depending on the position and agency, you may receive an interim clearance (also known as temporary eligibility) based on a preliminary investigation. This allows you to perform most classified work temporarily until the full background investigation and final clearance determination are completed. Interim clearances can often be granted within weeks of submitting your SF-86, provided no unmitigated disqualifying issues surface during the preliminary investigation. Agencies may withdraw interim clearances at any time if new concerns emerge during the full investigation. Failure to receive or withdrawal of an interim clearance is not considered a clearance denial or revocation.

What’s the process for getting a security clearance?

The security clearance process begins when you are sponsored by an employer (typically a federal agency or government contractor) for a position that requires access to classified information. You cannot apply for a clearance on your own. Once sponsored, you’ll complete the Standard Form 86 (SF-86), an extensive questionnaire that covers your personal history, finances, foreign contacts, and more.4

After submission, your application goes through several stages:

  1. Review and Initial Determination: If you’re applying for a contractor position, your company’s Facility Security Officer (FSO) will review your SF-86 for completeness and forward it to a government security office. Federal applicants submit directly to a government security office, where preliminary record checks and SF-86 review are conducted for completeness and potentially disqualifying information. Based on this review, an agency may:
    • Approve and initiate a background investigation, or 
    • Approve, initiate a background investigation, and issue an interim clearance, or 
    • Reject the application due to errors or omissions and return it to the applicant for corrections. 
  2. Background Investigation: 
    • For Secret clearances, this stage typically involves mailed inquiries and computerized record checks, including credit reports. If issues arise, investigators may conduct in-person subject interviews, reference interviews, and additional record checks.
    • For TS and SCI, this stage is much more intensive: in addition to the Secret clearance checks, investigators conduct a subject interview with you (often 1-3+ hours) and interviews with employers, coworkers, school associates, neighbors, and personal references from the past 7 years to corroborate your SF-86.
      • This stage can also include a polygraph examination (a “poly”), which is often required for positions in the intelligence community (IC) and law enforcement agencies, but only rarely in other parts of government. 
  3. Adjudication: Following the investigation, an adjudicator reviews the findings against Security Executive Agent Directive 4 (SEAD-4) guidelines and makes a decision. If unmitigated security concerns exist, the agency may issue you a Statement of Reasons (SOR)—a formal notice explaining why they have denied your clearance or why they intend to. An SOR is not the final decision; it gives you an opportunity to submit additional evidence or mitigating information before adjudicators make a determination.5
  4. Appeals (“Adjudication with a capital A”): If your clearance is formally denied or revoked, you can appeal. This begins a more complex process, with over 70 different adjudicative systems depending on the agency (executive branch agencies and regulatory commissions all run their own). However, all agencies must follow the basic appeal requirements in Executive Order 12968. In an appeal, you may submit written responses, supporting documents, and usually have the chance to make a personal appearance before an administrative judge or appeals panel. Your chance of success depends heavily on the strength of your evidence and whether you can demonstrate changes, rehabilitation, or mitigating circumstances.

What roles do you need a security clearance for?

Security clearance requirements vary significantly across US policy roles: for example, congressional staff rarely need clearances, while intelligence agency staff almost always do. The table below outlines where clearances are most common, the typical clearance level required, and common entry pathways to obtain one.

InstitutionHow common are clearances?Common entry pathways
Executive Office of the President (“White House”, e.g. NSC, OSTP)Very common, especially for national security roles. Interim TS/SCI may be granted for incoming staff for up to 6 months.Political appointments; agency detailees; fellowships (e.g. White House Fellows must be TS-clearable); internships (public trust only)
Federal departments & agencies (e.g. Departments of Defense, State, CommerceSometimes: common for those with a national security mission, such as the Department of Defense (DOD).6 All federal employees must pass a basic background check, regardless of whether their role requires clearance.Pathways internships; fellowships; scholarships for public service (e.g. SMART), civil-service hiring; military service; contractor-to-agency transitions. USAJobs lets you filter your searches based on security clearance level.
Intelligence Community (e.g. CIA, FBI)Virtually always TS/SCI, often includes a polygraph examination.7Direct agency hiring; IC internships; scholarships for public service (e.g. SMART); contractor-to-agency transitions
CongressRare: Only select staff require clearances (e.g. those on Intelligence, Armed Services, or Homeland Security committees, or who staff a member sitting on one of these committees). Congress has strict limits on cleared staff slots and doesn’t offer interim clearances.8Member/committee staff hiring; congressional fellowships; detailees from agencies (who bring their clearance)
National Labs & FFRDCs (DOE labs, RAND, MITRE, etc.)Very common (e.g. for work on nuclear materials and weapons programs, sensitive energy infrastructure, cybersecurity and defense research).Internships, postdocs, and fellowships (e.g. NNSA Graduate Fellowship → Q clearance); direct lab hiring; contractor-to-lab transitions
University Affiliated Research Centers (UARCs)9Very common, given work on DOD projectsUniversity-affiliated hiring; graduate research positions; transitions from academia
Think tanks / nonprofitsRare: Most standard DC think tanks (including those working on national security topics) have ~no cleared positions. Clearances can be required in unique cases, such as if a think tank or nonprofit operates FFRDCs or national labs under federal contract (e.g. RAND) or hosts sensitive advisory panels for government.Internships; fellowships; direct hire
ContractorsVery common for defense/national security-related work (e.g. Booz Allen)10College recruiting; internships; veterans; lateral hiring between firms. See contractor postings on ClearedJobs.Net or ClearanceJobs.com 

What can disqualify you (and how to mitigate it)

Failing a clearance application or other background check can create a permanent record that makes future federal employment more difficult, so it’s important to avoid such situations if possible. If you are denied, you can generally be sponsored again after a year and a day. 

Clearance decisions are based on the 13 adjudicative guidelines in the SEAD-4, which cover areas such as foreign influence, finances, personal conduct, and drug use. Adjudicators apply a “whole person” concept, weighing factors like the seriousness and recency of the conduct, whether it happened when you were younger, and whether you’ve shown rehabilitation or lasting changes in behavior. Young applicants, for example, may receive some leniency for past behavior.11 

Most factors that can make getting a security clearance more difficult (e.g. bad debt, illegal drug use) can often be mitigated and won’t automatically disqualify you, but a pattern of poor judgment or misconduct can add up to a denial. In some cases, one major issue (like deliberate dishonesty or serious criminal activity) can disqualify you.

Source

The following list highlights several areas of concern that most commonly cause clearance delays or denials. 

In addition to the commonly cited concern areas above, the other SEAD-4 risk areas are15:

  1. Allegiance to the United States: Any activity suggesting support for the overthrow of the US government or association with extremist, violent, or terrorist groups
  2. Foreign Preference: Actions that demonstrate preference for a foreign country over the US
  3. Sexual Behavior: Patterns of criminal, coercive, or high-risk sexual behavior 
  4. Criminal Conduct: A history or pattern of criminal behavior
  5. Handling Protected Information: Mishandling or unauthorized disclosure of classified material
  6. Outside Activities: Involvement in foreign or outside organizations that conflict with US interests or create divided loyalties
  7. Use of Information Technology: Misuse of government IT systems, unauthorized access, or improper handling of digital data

Security clearance tips

In addition to understanding the SEAD-4 risk factors and how to mitigate them, here are some tips for navigating the clearance process:

  1. Start early to gather relevant information (e.g. where you lived and traveled to, employers, your schools, foreign contacts) by reviewing the questions you’ll face. The 135+ page SF-86 can feel overwhelming, but this spreadsheet template can help you collect the right information early and save you headaches later.16 It’s often beneficial to begin recording this information now—while it’s relatively fresh—than delaying your clearance process later when it might be harder to access the relevant information.
  2. Be meticulous with the SF-86; don’t guess or leave gaps. To investigators, sloppiness, inconsistencies, or omissions could indicate carelessness or efforts to hide information.
  3. Look for “cheap” ways to get cleared: Student internships at national security agencies and even part-time work on a cleared project with a government contractor can be enough to secure sponsorship. Once you hold a clearance, it’s much easier to move into other cleared roles later.
  4. Register for the Selective Service by age 25 if you’re male (it’s required by law and employers check for this).
  5. Prepare for your interview: Know the kinds of questions you’ll get and practice providing honest and consistent answers. It often helps to review your SF-86 line-by-line before the interview, and to practice explaining any “red flag” areas beforehand out loud, as you would for a job interview. Your investigator may circle back to sensitive topics multiple times to test consistency, and they will directly confront you with any discrepancies between your form, records, and what others have reported.
  6. If in doubt, consult a security clearance lawyer: The bureaucracies that manage clearances and related processes across the federal government are complex, opaque, and heterogeneous, making them hard to navigate using only public/online information sources. As such, talking to people with first-hand knowledge can be very helpful; if you can afford to do so, we recommend talking to a lawyer specializing in federal background checks early in the process of pursuing a career in government service.17

If you’re looking for further resources to better understand the clearance process and how to prepare, people we’ve advised have found this and this security clearance FAQ particularly helpful.

FAQ

Further resources 


Footnotes